params.h File Reference

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Functions
paramT *	scale_parameters (void)
	Get precomputed energy contributions for all the known loop types. More...
paramT *	get_scaled_parameters (double temperature, model_detailsT md)
	Get precomputed energy contributions for all the known loop types. More...
pf_paramT *	get_scaled_pf_parameters (void)
pf_paramT *	get_boltzmann_factors (double temperature, double betaScale, model_detailsT md, double pf_scale)
	Get precomputed Boltzmann factors of the loop type dependent energy contributions with independent thermodynamic temperature. More...
pf_paramT *	get_boltzmann_factor_copy (pf_paramT *parameters)
	Get a copy of already precomputed Boltzmann factors. More...
pf_paramT *	get_scaled_alipf_parameters (unsigned int n_seq)
	Get precomputed Boltzmann factors of the loop type dependent energy contributions (alifold variant)
PUBLIC pf_paramT *	get_boltzmann_factors_ali (unsigned int n_seq, double temperature, double betaScale, model_detailsT md, double pf_scale)
	Get precomputed Boltzmann factors of the loop type dependent energy contributions (alifold variant) with independent thermodynamic temperature.