2Dfold.h File Reference

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Functions
TwoDfold_vars *	get_TwoDfold_variables (const char *seq, const char *structure1, const char *structure2, int circ)
	Get a structure of type TwoDfold_vars prefilled with current global settings. More...
void	destroy_TwoDfold_variables (TwoDfold_vars *our_variables)
	Destroy a TwoDfold_vars datastructure without memory loss. More...
TwoDfold_solution *	TwoDfoldList (TwoDfold_vars *vars, int distance1, int distance2)
	Compute MFE's and representative for distance partitioning. More...
char *	TwoDfold_backtrack_f5 (unsigned int j, int k, int l, TwoDfold_vars *vars)
	Backtrack a minimum free energy structure from a 5' section of specified length. More...