energy_const.h File Reference

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Macros
#define	GASCONST   1.98717 /* in [cal/K] */
#define	K0   273.15
#define	INF   10000000 /* (INT_MAX/10) */
#define	FORBIDDEN   9999
#define	BONUS   10000
#define	NBPAIRS   7
#define	TURN   3
#define	MAXLOOP   30

Detailed Description

energy constants

Macro Definition Documentation

#define GASCONST   1.98717 /* in [cal/K] */

The gas constant

#define K0   273.15

0 deg Celsius in Kelvin

#define INF   10000000 /* (INT_MAX/10) */

Infinity as used in minimization routines

#define FORBIDDEN   9999

forbidden

#define BONUS   10000

bonus contribution

#define NBPAIRS   7

The number of distinguishable base pairs

#define TURN   3

The minimum loop length

#define MAXLOOP   30

The maximum loop length