Data Fields
double *	Pi
	probabilities of interaction

double *	Gi
	free energies of interaction

double	Gikjl
	full free energy for interaction between [k,i] k<i in longer seq and [j,l] j<l in shorter seq

double	Gikjl_wo
	Gikjl without contributions for prob_unpaired.

int	i
	k<i in longer seq

int	k
	k<i in longer seq

int	j
	j<l in shorter seq

int	l
	j<l in shorter seq

int	length
	length of longer sequence

The documentation for this struct was generated from the following file:

Data Fields