mm.h

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#ifndef __VIENNA_RNA_PACKAGE_MM_H__
#define __VIENNA_RNA_PACKAGE_MM_H__

unsigned int  maximumMatching(const char *string);

unsigned int *maximumMatchingConstraint(const char *string,
                                        short *ptable);

unsigned int *maximumMatching2Constraint( const char *string,
                                          short *ptable,
                                          short *ptable2);

#endif